SBW - Systems Biology Workbench is a simple, easy-to-use framework specially designed for application inter-communications.
It uses a broker-based, distributed, message-passing architecture, supports many languages including Java, C++, Perl & Python.
What's New in This Release: [ read full changelog ]
SBML Layout:
· Reading Support for SBML Layout Extension (for SBML L3)
· (at the moment the library only writes annotations though)
· Stability and performance improvements for Layout Viewer.
· SBGN upgrade
Bug Fix:
· Global Render Information were not correctly read
Stability:
Now works even independently of SBW SED-ML:
· Support for Kisao Terms (full lookup and browsing of the hierarchy).
Bug Fixes for error correction facility RoadRunner:
· BugFix: non integral stoichiometry for L1 models
· BugFix: model refused to load when non-L3 model used ids in speciesreferences
· BugFix: L1 model with local parameters refused to load
· BugFix: L1 model with non-integral stoichiometry was incorrect
BugFix: hasOnlySubstanceUnits was ignored in some places NOM:
· added methods: reorderRules : string reorderRules(string) inlineFunctionDefinitions : string inlineFunctionDefinitions(string)
· (rules are automatically reordered by loadSBML, this will allow other modules to work correctly without code ch...
Find us on Google+
