Describing haplotypes from sequence alignments. #Sequence alignment #Describe haplotype #Sequence to haplotype #Sequence2haplotype #Haplotype #Sequence
COLLAPSE is a simple tool for collapsing sequences to haplotypes (unique sequences). It can read DNA sequence alignments in NEXUS or PHYLIP "sequential" format. The program indicates which sequences belong to which haplotype and generates an alignment in phylip format including the haplotypes. Give Collapse a try to see what it's really capable of!
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Collapse 1.2
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