Grinder 0.5.2

Tool for generating random amplicon and shotgun libraries

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What's new in Grinder 0.4.8:

  • Fixed bug when making amplicon reads using specified relative abundances based on genomes with multiple amplicons.
  • Usage message improvements.
  • Delegated some operations to dedicated modules.
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LICENSE TYPE:
GPL 
FILE SIZE:
207 KB
USER RATING:
UNRATED
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DEVELOPED BY:
Florent Angly
CATEGORY:
C: \ Science / CAD
Grinder is a program that allows you to create artificial random shotgun and amplicon sequence libraries.

The libraries generated are based on reference sequences in a FASTA file. Grinder can produce metagenomes, pyrotag datasets or shotgun sequencing projects, which can be used to test the accuracy of bioinformatic tools or help decide between alternative sequencing methods in an experiment.

Last updated on April 28th, 2013

Runs on: Windows All

feature list requirements

#sequence library #generate sequence #bioinformatics tool #sequence #generate #amplicon #metagenome

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