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 Part of the Chemistry Managers download hub |
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User Rating:
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Good (3.0/5)
36 user(s) |
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Jmol description
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An applet and Java based application designed to display various 3D chemical information.
Jmol is an applet and Java based application designed to display various 3D chemical information.
Jmol's features include reading a variety of file types and output from quantum chemistry programs, and animation of multi-frame files and computed normal modes from quantum programs
Here are some key features of "Jmol":
· The JmolApplet is a web browser applet that can be integrated into web pages. It is ideal for development of web-based courseware and web-accessible chemical databases. The JmolApplet provides an upgrade path for users of the Chime plug-in.
· The Jmol application is a standalone Java application that runs on the desktop.
· The JmolViewer can be integrated as a component into other Java applications.
· Translated into multiple languages: Catalan (ca), Chinese (both zh_CN and zh_TW) Czech (cs), Dutch (nl), French (fr), German (de), Hungarian (hu), Italian (it), Korean (ko), Portuguese - Brazil (pt_BR), Spanish (es), Turkish (tr), (in addition to the native American English, en-US, and British English, en-GB).
· Automatically adopts the language of the user's operating system, if it is among the translations available. You can change to another language if desired.
· Supports all major web browsers: Internet Explorer, Mozilla and Firefox, Safari, Google Chrome, Opera, Konqueror, IceWeasel
· High-performance 3D rendering with no hardware requirements
· Support for unit cell and symmetry operations
· Schematic shapes for secondary structures in biomolecules
Requirements:
· Java Runtime Environment
What's New in This Release: [ read full changelog ]
· new feature: JCAMP-DX file reading
· reading of ##$MODELS and ##$PEAK_LINKS (see http://chemapps.stolaf.edu/jmol/docs/examples-12/jspecview)
· new feature: context menu Spectra submenu
· new feature: JSpecView integration into Jmol application
· if model/peak-enhanced JDX file is read, clicking on an atom or switching
· to an IR vibration or MS fragment displays the appropriately highlighted spectrum/fragment
· bug fix: SLAB unit cell not showing all lines
· bug fix: CRYSTAL reader needs to change to MOLECULAR when X(ANGSTROMS) found (fullerene slab)
· new feature: model ID "..."
· can be file-specific using "filename#..."
· used for correlating non-Jmol synced applets
· new feature: sync ~ 'Select: xxx'
· xxx can include file="xxx" model="xxx" atoms="xxx" select="xxx" script="xxx"
· file and model combined as model ID "file#model"
· will automatically load the file if the given file#model ID is not found
· atoms = list of atom numbers separated by commas: 1,2,3 --> @1 or @2 or @3
· select is any vali...
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