MS/MS Automated Selected Ion Chromatogram generator
MASIC can read Finnigan .Raw files, mzXML files, mzData files or .cdf/.mgf combo files. Results are outputted both as flat files (.txt) and in an XML file that can be read using the accompanying graphical results browser. The browser provides a fast, graphical method for browsing the SICs identified by MASIC, allowing the user to sort and filter the SIC list as desired. MASIC has been in routine use in the PRISM pipeline since 2004 and has been used to process over 40,000 datasets. MASIC has also been updated to provide basic support for MRM datasets.
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What's New in This Release:
- New version of MSDataFileReader.dll
- Added support for reading SRM and MRM info from mzXML files
- Thermo files should be processed using ReadW so that they have the filterLine XML attribute in the scan element
- For Non-thermo files, looking for attribute scanType in the scan element