Path-O-Gen Changelog

What's new in Path-O-Gen 1.4

Jun 28, 2014
  • New features:
  • Improved the date parsing. Will now read dates with variable precision.
  • Can specify date precision in table. These are shown as bars in the plot
  • Minor other tweaks

New in Path-O-Gen 1.3 (Nov 6, 2010)

  • New features:
  • Improved the root optimization to use linear regression - should be more robust
  • Can import Newick as well as NEXUS tree files
  • A new feature: MRCA trace which shows a trace from selected tips to the interpolated position of their MRCA. This can help find anomalous tips (perhaps indicating contamination or mislabelling).

New in Path-O-Gen 1.2 (Oct 28, 2010)

  • More plots and linked selection of taxa
  • New features:
  • Added the ability to select points in the plots and the equivalent taxa will be highlighted in the tree (and vice-versa).
  • Added a residual plot for time-sampled trees. This shows the distribution of residual from the regression line to look for outliers.

New in Path-O-Gen 1.1 (Oct 28, 2010)

  • Added a more flexible tree viewing component (based on FigTree)
  • Tips of a dated tip tree are now shown coloured by their residual from the root to tip regression line (blue: above, red: below, black on the regression).