RNA Tertiary Structural Analysis Programs
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| We will be seeking NIH funding for continued research, development and maintenance of the Structural Classification of RNA (SCOR) database. We are surveying current and potential users to learn who uses SCOR, and how it is used. This survey is important to our future development of SCOR. We ask that you please take our survey. | ||
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RNA Tertiary Structural Analysis Programs
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| RZparser | tar.gz or zip file for Windows, Macintosh, and UNIX/LINUX. | |||
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This is a JAVA program to parse ribose zipper from PDB file(s). The program also create PyMOL scripts corresponding to ribose zipperes. |
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| SeqLogo | tar.gz or zip file for Windows, Macintosh, and UNIX/LINUX. | |||
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This is a JAVA program to create Sequence Logo from Ribosomal RNA Database Project II style RNA sequence alignment file or The European Ribosomal RNA Database style RNA alignment file. |
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Contact us at scor@compbio.berkeley.edu |