What's new in SeaView 5.0.5
Nov 22, 2021
- NEW: seaview performs reconcilation between gene and species trees using Treerecs version 1.2
- NEW: bootstrap support optionally with the "Transfer Bootstrap Expectation" method
- NEW: trimming-rule to shorten long sequence names in phylogenetic trees
- NEW: 64-bit version for the MS Windows platform
- NEW: multiple-tree windows
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
New in SeaView 5.0.4 (Jun 19, 2020)
- NEW: seaview performs reconcilation between gene and species trees using Treerecs version 1.2
- NEW: bootstrap support optionally with the "Transfer Bootstrap Expectation" method
- NEW: trimming-rule to shorten long sequence names in phylogenetic trees
- NEW: 64-bit version for the MS Windows platform
- NEW: multiple-tree windows
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
New in SeaView 5.0.3 (Jun 11, 2020)
- NEW: seaview performs reconcilation between gene and species trees using Treerecs
- NEW: bootstrap support optionally with the "Transfer Bootstrap Expectation" method
- NEW: trimming-rule to shorten long sequence names in phylogenetic trees
- NEW: 64-bit version for the MS Windows platform
- NEW: multiple-tree windows
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
New in SeaView 5.0.1 (Feb 26, 2020)
- NEW: seaview performs reconcilation between gene and species trees using Treerecs
- NEW: bootstrap support optionally with the "Transfer Bootstrap Expectation" method
- NEW: trimming-rule to shorten long sequence names in phylogenetic trees
- NEW: 64-bit version for the MS Windows platform
- NEW: multiple-tree windows
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
New in SeaView 5.0 (Dec 29, 2019)
- seaview drives program "treerecs" to reconcile gene and species trees
New in SeaView 4.7 (May 3, 2018)
- NEW: bootstrap support optionally with the "Transfer Bootstrap Expectation" method
- NEW: trimming-rule to shorten long sequence names in phylogenetic trees
- NEW: 64-bit version for the MS Windows platform
- NEW: multiple-tree windows
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
- NEW: seaview drives the Clustal Ω v1.2 program to perform multiple sequence alignment.
New in SeaView 4.6.5 (Apr 10, 2018)
- NEW: trimming-rule to shorten long sequence names in phylogenetic trees
- NEW: 64-bit version for the MS Windows platform
- NEW: multiple-tree windows
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
- NEW: seaview drives the Clustal Ω v1.2 program to perform multiple sequence alignment.
New in SeaView 4.6.3 (Nov 24, 2017)
- NEW: trimming-rule to shorten long sequence names in phylogenetic trees
- NEW: 64-bit version for the MS Windows platform
- NEW: multiple-tree windows
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
- NEW: seaview drives the Clustal Ω v1.2 program to perform multiple sequence alignment.
New in SeaView 4.6.2 (Jul 12, 2017)
- NEW: trimming-rule to shorten long sequence names in phylogenetic trees
- NEW: 64-bit version for the MS Windows platform
- NEW: multiple-tree windows
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
- NEW: seaview drives the Clustal Ω v1.2 program to perform multiple sequence alignment.
New in SeaView 4.6.1 (Aug 30, 2016)
- NEW: trimming-rule to shorten long sequence names in phylogenetic trees
New in SeaView 4.6 (Mar 4, 2016)
- NEW: 64-bit version for the MS Windows platform
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
- NEW: seaview drives the Clustal Ω v1.2 program to perform multiple sequence alignment.
New in SeaView 4.5.4 (Mar 25, 2015)
- NEW: multiple-tree windows
New in SeaView 4.5.3 (Sep 23, 2014)
- NEW: seaview uses PHYLIP v3.696 to compute parsimony trees
New in SeaView 4.5.2 (Jun 2, 2014)
- NEW: seaview uses PHYLIP v3.695 to compute parsimony trees
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
- NEW: seaview drives the Clustal Ω program to perform multiple sequence alignment.
New in SeaView 4.5.1 (Apr 28, 2014)
- NEW: seaview can be run without GUI using a command line
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
- NEW: seaview drives the Clustal Ω program to perform multiple sequence alignment.
New in SeaView 4.5.0 (Mar 24, 2014)
- NEW: seaview drives the PhyML v3.1 program to compute maximum likelihood phylogenetic trees.
- NEW: seaview drives the Gblocks program to select blocks of conserved sites.
- NEW: seaview drives the Clustal Ω program to perform multiple sequence alignment.
New in SeaView 2.2 (Oct 24, 2007)
- Seaview is now interfaced with the muscle alignment program in addition to clustalw
- Use "Props:View as proteins" to align protein-coding DNA sequences
- Easy interfacing with external multiple sequence alignment programs
- Work with multiple alignment windows