Primer Analysis Software. #Primer Analysis #Analyze Primer #Molecular Analysis #Primer #Analysis #Gene
Oligo is the essential tool for designing and analyzing sequencing and PCR primers, synthetic genes, and various kinds of probes including siRNA and molecular beacons.
Based on the most up-to date nearest neighbor thermodynamic data, Oligo's search algorithms find optimal primers for PCR, including TaqMan, highly multiplexed, consensus or degenerate primers. Multiple file batch processing is possible. It is also an invaluable tool for site directed mutagenesis.
For each primer or primer pair, Oligo's various analysis windows show a multitude of useful data, such as DNA and RNA secondary structure, dimer formation, false priming and homology, internal stability, composition and physical properties.
With Oligo you can analyze open reading frames down to predicted molecular weight and pKa of proteins, and search for restriction enzyme sites, not only in DNA but also in reverse-translated proteins.
Oligo can automatically select multiplex primers, process sequence files in batch modes, automatically design PCR primers to cover multiple DNA regions in just one search and automatically find primer/probe sets for real time PCR or finds nested primers sets.
Users will be able to customize the search protocols (scoring system), therefore the results can be optimized depending on everyone's specific necessities.
System requirements
- Java
- Intel processors and Pentium or higher
- Minimum disk space: 20 MB
- Minimum RAM: 128 MB
Limitations in the unregistered version
- Unregistered version would not let you select primers from your own sequence file
- Creating new sequence files is disabled
- Editing the entire sequence is disabled
- Opening sequence files is disabled
- Saving sequence files is disabled
What's new in Oligo 7.56:
- Due to recent changes in Java the Internal Stability Window for the primers appeared blank when invoked te first time. Fixed.
Oligo 7.56
add to watchlist add to download basket send us an update REPORT- runs on:
- Windows All
- file size:
- 12.8 MB
- filename:
- Oligo7WinDemo_Installer.zip
- main category:
- Science / CAD
- developer:
- visit homepage
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- calibre
- Context Menu Manager
- Windows Sandbox Launcher
- IrfanView
- Microsoft Teams
- Zoom Client
- ShareX