Flexible and accessible constraint analysis and modelling platform that manages to implement FBA, FVA and element/charge balancing analyses #Biology framework #Development framework #Python framework #Biology #Framework #FBA
PySCeS-CBM, also known as CBMPy, was created as an open source constraint modelling and analysis framework.
PySCeS-CBM is a framework that comes with a flexible and extensible architecture. CBMPy uses and translates structures (metabolites, reactions, compartments) into mathematical structures needed for advanced analysis.
System requirements
- Python
- Python(x,y)
- wxPython
- ETS
- SymPy
- NetworkX
- NumPy
What's new in PySCeS-CBM 0.7.0 Beta:
- CBMPy 0.7.0 has been released. Many new features, bugfixes and updated documentation. This release includes complete support for the SBML Level 3 FBC format, importing/exporting COBRA format, exporting human and machine readable version of models as OMEX/COMBINE archives, reading/writing Excel workbooks and MIRIAM annotations using Identifiers.org urls. CPLEX/GLPK solver API's have been enhanced and,amongst other things,FVA functionality has been optimized (2014-12-02)
- PySCeS CBMPy Reference Documentation and Installation guide (0.7.0) html pdf (2014-12-02)
- new PySCeS-CBM Mariner now available for download. Inculdes GLPK support and performance enhancements (2014-09-03)
PySCeS-CBM 0.7.0 Beta / 0.7.1 r306 PreRelease
add to watchlist add to download basket send us an update REPORT- runs on:
-
Windows 8
Windows 7
Windows Vista
Windows XP - file size:
- 1.3 MB
1 screenshot:
- main category:
- Science / CAD
- developer:
- visit homepage
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