Affymetrix Genotyping Console icon

Affymetrix Genotyping Console

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Certified 100% CLEAN Shareware   

Displays metrics and annotation data in a tabular form so you can evaluate information quality for a given array #Genotype array  #Genotype analysis  #Analyze cytogenetic gene  #Genotype  #Nucleotide  #Analyzer  

Description

changelog

Free Download

Affymetrix Genotyping Console is a reliable and comprehensive software that provides users with a simple means of performing genotype analysis from various arrays such as human and non-human arrays.

With its intuitive interface, you have the possibility to integrate single nucleotide polymorphism (SNP) and cytogenetic analysis into one application.

System requirements

What's new in Affymetrix Genotyping Console 4.1.4.840:

  • Some probesets are in result CHP file but not in annotation file. During PLINK export,GTC took the first ID and applied the first ID to all of them. The fix is to use their true probeset IDs for these probesets. All of them will get 0s in the PLINK export since there is no annotation information available.
  • With updated library files, GTC now reserves APT output files such as AximGT1.calls.txt, AxiomGT1.confidences.txt, AxiomGT1.summary.txt, AxiomGT1.report.txt and AxiomGT1.snp posterior.txt in the GTC result folder.
Read the full changelog

Affymetrix Genotyping Console 4.1.4.840

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  runs on:
Windows 2008 64 bit
Windows 8 32/64 bit
Windows 7 32/64 bit
Windows XP 32/64 bit
  file size:
610 KB
  filename:
GenotypingConsole_4_1_4_32bit.zip
  11 screenshots:
Affymetrix Genotyping Console - With the help of Affymetrix Genotyping Console you are able to perform genotyping analysis on data from new types of arraysAffymetrix Genotyping Console - From the File menu you have the possibility to close the current workspace, edit sample files or open a new annotation fileAffymetrix Genotyping Console - You can navigate to the Edit menu if you want to delete the user profile, add a new genotype configuration or access the Options windowAffymetrix Genotyping Console - screenshot #4Affymetrix Genotyping Console - screenshot #5Affymetrix Genotyping Console - screenshot #6Affymetrix Genotyping Console - screenshot #7Affymetrix Genotyping Console - screenshot #8Affymetrix Genotyping Console - screenshot #9Affymetrix Genotyping Console - screenshot #10Affymetrix Genotyping Console - screenshot #11
  main category:
Science / CAD
  developer:
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